Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843069.1_cds_XP_016508626.1_21629
CDS Infomation

[gene=LOC107826186] [db_xref=GeneID:107826186] [protein=pentatricopeptide repeat-containing protein At2g36730-like] [protein_id=XP_016508626.1] [location=join(2543..3081,4413..5244)] [gbkey=CDS]
Sequence

ATGATTTCCCACCAAATTGACGCACTTTTCCAACGGTCCAAAACGACTCTCCATCTTCTC
CAACTTCATTCTCTAATAATCAAAATAGCTCTTGATCACGACGAATATCGTCTTTCCCAG
TTCATATCCTTCTCATCTTCAATATCTCTCCAATTTTCTCGCACAATCTTCGATAATTCT
CCAATTACTCCACCAATCTTCGCTTGGAACACACTGATGAGAGCATATTCAAAAAGCTCC
ACGAAAATTGAGTCCGTGAAGCTCTTTAACCAGCTTCAAAAAATGGAATTAAAACAAGAT
AAATTCACATTACCTGTCGTGCTAAAATCTTGTGGGCATTGTTTGATGATTGGAACTGGT
GGGTCGTTGCATTCAATGGCTTTCAAGTCCGGTTTCAGTTCGGACATACATGTGAACAAT
ACCCTTTTGAGAATGTATGCGGTATTTGGTGCGATCGGATATGCTCGGCGAGTGTTTGAT
GAAATGCTTGAGAGGGATATAGTTTCTTGGAGTTCTATGATAGCCGCTTATGTTCATTGT
AACTTGCCTTCAGATGCTCTGCTCCTGTTTCAAAGCATGAAGCTAGCAAATGAACAGCCA
AATTCCATCACTTTGGTCAGCTTGCTTGGAGCATGTACTCATGTCCTGAATATCAGATTA
GGGAGATGTATTCACTCGCACATTGTCACCAGTGGTATTGAACTACATGTTGAACTGGAA
ACAGCCCTCCTGGGAATGTATGCAAAATGCGGGCATATAGAGCAGGCTTTCCACATCTTC
AATTCAATGGCTGACAGAAATCTGCAGACCTGGACCATCATGATTTCTGGCCTTGCCGAT
AATGGCCATGGAGAAGAAGCTGTATCCTTGTTTACCTGCATGGAAGAAGTTGGCTTTAGA
CCGGACAGCTTGTCATTTTCTGCGATTCTATGTGCTTGTAGTCATAAAGGCCTTGTTGAT
TTGGGCCGTAAATATTTTCATAAAATGGTAAGTATTTACAACATCAGGCCAACTATGGAA
CACTATGGATGCATGGTGGATATGTTTGGACGTGCTGGAGAATTAGAAGAAGCTTATGAT
CTTATAAAGAGCATGCCTATAGAGCCAAATTCTGTGATACTTAGGAGTTTCATTAGTGCT
TGTAAGCATCATGGTCGTGTTCCTTGTGCAGACGAAAATATAAGAGATATTCTGCTCAAA
ATAGAGCCTGAACTCGGATCAAACTATGTACTTGCTTCCAATTTGTCTTTTCTTTTTAAT
TGCAATGATGCAAACAGCCTAAGATCAGCGATGAAAGTGAAAGGGATAAAGAAACATCCT
GGTAGTAGTTGGGTGCAGCTGCTTGGTGGTTCTTCAGAGGACAGCATTTGA

Peptide Sequence

PEP ID

XP_016508626.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g36730-like [Nicotiana tabacum]
Sequence

MISHQIDALFQRSKTTLHLLQLHSLIIKIALDHDEYRLSQFISFSSSISLQFSRTIFDNS
PITPPIFAWNTLMRAYSKSSTKIESVKLFNQLQKMELKQDKFTLPVVLKSCGHCLMIGTG
GSLHSMAFKSGFSSDIHVNNTLLRMYAVFGAIGYARRVFDEMLERDIVSWSSMIAAYVHC
NLPSDALLLFQSMKLANEQPNSITLVSLLGACTHVLNIRLGRCIHSHIVTSGIELHVELE
TALLGMYAKCGHIEQAFHIFNSMADRNLQTWTIMISGLADNGHGEEAVSLFTCMEEVGFR
PDSLSFSAILCACSHKGLVDLGRKYFHKMVSIYNIRPTMEHYGCMVDMFGRAGELEEAYD
LIKSMPIEPNSVILRSFISACKHHGRVPCADENIRDILLKIEPELGSNYVLASNLSFLFN
CNDANSLRSAMKVKGIKKHPGSSWVQLLGGSSEDSI

Transcript Sequence

Gene sequence data has not been registered.